Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | AO275_21665 | Not Available | Positive | 2422637 - 2423509 | 31870.3 |
| abc transporter permease | AO275_21670 | Not Available | Positive | 2423513 - 2424307 | 28706.9 |
| ferredoxin | AO275_21675 | Not Available | Positive | 2424329 - 2424637 | 10900.0 |
| (2fe-2s)-binding protein | AO275_21680 | Not Available | Positive | 2424634 - 2425995 | 49069.9 |
| fad-binding oxidoreductase | AO275_21685 | Not Available | Positive | 2425992 - 2427209 | 42713.1 |
| spermidine/putrescine abc transporter substrate-binding protein | AO275_21690 | Not Available | Positive | 2427206 - 2428258 | 37911.7 |
| sodium:proton antiporter | AO275_21695 | Not Available | Positive | 2428648 - 2430000 | 48469.9 |
| cyclic pyranopterin phosphate synthase moaa | AO275_21700 | Not Available | Positive | 2430235 - 2431233 | 37102.9 |
| hypothetical protein | AO275_21705 | Not Available | Negative | 2431247 - 2431786 | 20368.4 |
| hypothetical protein | AO275_21710 | Not Available | Negative | 2431804 - 2432325 | 19331.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
