Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyltransferase | AO275_21615 | Not Available | Positive | 2414234 - 2414809 | 21577.0 |
| hypothetical protein | AO275_21620 | Not Available | Negative | 2414919 - 2415191 | 10512.4 |
| hypothetical protein | AO275_21625 | Not Available | Negative | 2415349 - 2416917 | 57778.5 |
| hypothetical protein | AO275_21630 | Not Available | Positive | 2417567 - 2417845 | 10499.7 |
| peptidylprolyl isomerase | AO275_21635 | Not Available | Positive | 2417965 - 2418306 | 12342.9 |
| peptidase | AO275_21640 | Not Available | Positive | 2418438 - 2418665 | 8417.28 |
| hypothetical protein | AO275_21645 | Not Available | Positive | 2418718 - 2419416 | 24785.2 |
| methyltransferase | AO275_21650 | Not Available | Positive | 2419465 - 2420427 | 36428.7 |
| iclr family transcriptional regulator | AO275_21655 | Not Available | Negative | 2420532 - 2421383 | 30797.0 |
| fe3+/spermidine/putrescine abc transporter atp-binding protein | AO275_21660 | Not Available | Positive | 2421612 - 2422640 | 37573.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
