Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobalamin biosynthesis protein cobe | AO275_21555 | Not Available | Positive | 2398518 - 2398967 | 15553.8 |
| precorrin-4 c11-methyltransferase | AO275_21560 | Not Available | Positive | 2398999 - 2399745 | 26794.3 |
| taurine catabolism dioxygenase | AO275_21570 | Not Available | Negative | 2400169 - 2401008 | 30744.8 |
| hypothetical protein | AO275_21575 | Not Available | Negative | 2401106 - 2402272 | 42808.4 |
| metallophosphoesterase | AO275_21580 | Not Available | Positive | 2402453 - 2402911 | 16727.3 |
| acetyltransferase | AO275_21585 | Not Available | Negative | 2402921 - 2403379 | 17733.8 |
| type iv secretion protein rhs | AO275_21590 | Not Available | Positive | 2403750 - 2405582 | 69063.5 |
| cytoplasmic protein | AO275_21595 | Not Available | Positive | 2405605 - 2406207 | 22996.4 |
| hypothetical protein | AO275_21605 | Not Available | Positive | 2409882 - 2410064 | 6770.73 |
| hypothetical protein | AO275_21610 | Not Available | Positive | 2411384 - 2413762 | 90080.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
