Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase | AO275_21505 | Not Available | Positive | 2387191 - 2387754 | 20804.9 |
| n-acetylglucosamine-6-sulfatase | AO275_21510 | Not Available | Positive | 2387751 - 2388329 | 22053.2 |
| fis family transcriptional regulator | AO275_21515 | Not Available | Negative | 2388273 - 2389598 | 49678.7 |
| hypothetical protein | AO275_21520 | Not Available | Positive | 2389907 - 2390173 | 9707.41 |
| magnesium chelatase | AO275_21525 | Not Available | Negative | 2390337 - 2390927 | 21421.0 |
| magnesium chelatase | AO275_21530 | Not Available | Negative | 2391005 - 2392042 | 37061.0 |
| cobalamin biosynthesis protein cobn | AO275_21535 | Not Available | Negative | 2392042 - 2395806 | 138985.0 |
| cobalamin biosynthesis protein cobw | AO275_21540 | Not Available | Negative | 2395810 - 2396919 | 40340.4 |
| cobalt transporter | AO275_21545 | Not Available | Positive | 2397622 - 2397807 | 6307.42 |
| cobalt transporter | AO275_21550 | Not Available | Positive | 2397818 - 2398540 | 25521.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
