Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetylglucosaminylphosphatidylinositol deacetylase | AO275_21455 | Not Available | Positive | 2379078 - 2379851 | 28032.1 |
| methyltransferase | AO275_21460 | Not Available | Positive | 2379848 - 2380471 | 24147.3 |
| glycosyl transferase | AO275_21465 | Not Available | Positive | 2380443 - 2381096 | 23331.7 |
| dienelactone hydrolase | AO275_21470 | Not Available | Negative | 2381138 - 2382208 | 38429.9 |
| fmn-dependent nadh-azoreductase | AO275_21475 | Not Available | Negative | 2382548 - 2383153 | 21520.3 |
| lysr family transcriptional regulator | AO275_21480 | Not Available | Negative | 2383226 - 2384185 | 35164.3 |
| 3-oxoadipate enol-lactonase | AO275_21485 | Not Available | Negative | 2384423 - 2385217 | 28496.4 |
| hypothetical protein | AO275_21490 | Not Available | Positive | 2385344 - 2385688 | 12866.8 |
| hypothetical protein | AO275_21495 | Not Available | Negative | 2385683 - 2386123 | 16615.1 |
| udp pyrophosphate phosphatase | AO275_21500 | Not Available | Negative | 2386120 - 2386950 | 30390.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
