Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6-phosphogluconate dehydrogenase | AO275_21405 | Not Available | Negative | 2364216 - 2365190 | 35115.7 |
| hypothetical protein | AO275_21410 | Not Available | Positive | 2365502 - 2365675 | 6416.93 |
| gnat family acetyltransferase | AO275_21415 | Not Available | Negative | 2365941 - 2366432 | 17809.6 |
| glycogen synthase | AO275_21420 | Not Available | Positive | 2367027 - 2368619 | 57864.2 |
| malto-oligosyltrehalose trehalohydrolase | AO275_21425 | Not Available | Positive | 2368638 - 2370455 | 68108.0 |
| 4-alpha-glucanotransferase | AO275_21430 | Not Available | Positive | 2370445 - 2372523 | 75981.3 |
| maltooligosyl trehalose synthase | AO275_21435 | Not Available | Positive | 2372520 - 2375303 | 104431.0 |
| hypothetical protein | AO275_21440 | Not Available | Positive | 2375321 - 2375713 | 13510.1 |
| glycogen debranching protein | AO275_21445 | Not Available | Positive | 2375871 - 2378054 | 81984.8 |
| acyl-coa dehydrogenase | AO275_21450 | Not Available | Positive | 2378051 - 2379085 | 37095.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
