Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione reductase | AO275_21355 | Not Available | Negative | 2355109 - 2356467 | 49361.3 |
| utp--glucose-1-phosphate uridylyltransferase | AO275_21360 | Not Available | Negative | 2356573 - 2357412 | 30751.2 |
| hypothetical protein | AO275_21365 | Not Available | Positive | 2357856 - 2358137 | 9654.55 |
| hypothetical protein | AO275_21370 | Not Available | Negative | 2358186 - 2358536 | 12484.2 |
| hypothetical protein | AO275_21375 | Not Available | Positive | 2358707 - 2359012 | 11385.6 |
| hypothetical protein | AO275_21380 | Not Available | Positive | 2359035 - 2359214 | 6559.7 |
| alpha-ketoglutarate-dependent dioxygenase | AO275_21385 | Not Available | Positive | 2359240 - 2359917 | 24844.6 |
| glycosyl hydrolase | AO275_21390 | Not Available | Negative | 2359935 - 2361755 | 67237.9 |
| hydrolase | AO275_21395 | Not Available | Negative | 2361861 - 2362691 | 29619.2 |
| glucose-6-phosphate dehydrogenase | AO275_21400 | Not Available | Negative | 2362684 - 2364216 | 57216.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
