Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldo/keto reductase | AO275_21255 | Not Available | Negative | 2330197 - 2331267 | 38691.5 |
| arac family transcriptional regulator | AO275_21260 | Not Available | Positive | 2331418 - 2332320 | 32738.7 |
| hypothetical protein | AO275_21265 | Not Available | Negative | 2332348 - 2333232 | 32847.9 |
| nagc family transcriptional regulator | AO275_21270 | Not Available | Negative | 2333266 - 2334396 | 41024.4 |
| hypothetical protein | AO275_21275 | Not Available | Positive | 2334666 - 2337209 | 93847.8 |
| protein tolq | AO275_21280 | Not Available | Positive | 2337261 - 2337959 | 25259.8 |
| protein tolr | AO275_21285 | Not Available | Positive | 2337956 - 2338402 | 15950.4 |
| hypothetical protein | AO275_21290 | Not Available | Positive | 2338399 - 2339364 | 33325.4 |
| rnd transporter mfp subunit | AO275_21295 | Not Available | Positive | 2339510 - 2340751 | 44477.0 |
| transporter | AO275_21300 | Not Available | Positive | 2340764 - 2343955 | 115327.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
