Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arsr family transcriptional regulator | AO275_21205 | Not Available | Positive | 2321657 - 2321959 | 11320.7 |
| tetr family transcriptional regulator | AO275_21210 | Not Available | Negative | 2321976 - 2322560 | 22047.4 |
| dimethylallyltransferase | AO275_21215 | Not Available | Positive | 2322769 - 2323446 | 24130.4 |
| oxidoreductase | AO275_21220 | Not Available | Positive | 2323549 - 2324673 | 40910.4 |
| gcn5 family acetyltransferase | AO275_21225 | Not Available | Positive | 2324811 - 2325236 | 15716.8 |
| nudix hydrolase | AO275_21230 | Not Available | Positive | 2325375 - 2325818 | 16295.4 |
| peptide transporter | AO275_21235 | Not Available | Negative | 2325973 - 2327721 | 61074.8 |
| haloacid dehalogenase | AO275_21240 | Not Available | Negative | 2327802 - 2328521 | 26733.9 |
| short-chain dehydrogenase | AO275_21245 | Not Available | Negative | 2328612 - 2329466 | 30253.3 |
| ketosteroid isomerase | AO275_21250 | Not Available | Negative | 2329588 - 2330118 | 19085.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
