Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| purine nucleoside permease | AO275_16115 | Not Available | Positive | 120644 - 121666 | 37555.6 |
| collagen pro alpha-chain precursor | AO275_16120 | Not Available | Negative | 121727 - 122485 | 25443.5 |
| hypothetical protein | AO275_16125 | Not Available | Negative | 122478 - 122753 | 10086.8 |
| hypothetical protein | AO275_16130 | Not Available | Positive | 123008 - 123505 | 18632.3 |
| hypothetical protein | AO275_16135 | Not Available | Positive | 123509 - 123982 | 17155.1 |
| ligand-gated channel | AO275_16140 | Not Available | Negative | 124281 - 126719 | 87638.2 |
| hypothetical protein | AO275_16145 | Not Available | Negative | 126853 - 127455 | 21958.1 |
| hypothetical protein | AO275_16150 | Not Available | Positive | 127569 - 128060 | 19038.1 |
| mfs transporter | AO275_16155 | Not Available | Negative | 128070 - 128399 | 11766.6 |
| hypothetical protein | AO275_16160 | Not Available | Negative | 128643 - 128894 | 9569.14 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
