Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | AO275_21155 | Not Available | Negative | 2311378 - 2313459 | 75692.8 |
| chemotaxis protein | AO275_21160 | Not Available | Positive | 2313985 - 2315286 | 49213.9 |
| arac family transcriptional regulator | AO275_21165 | Not Available | Negative | 2315417 - 2316271 | 31177.7 |
| hypothetical protein | AO275_21170 | Not Available | Positive | 2316425 - 2316832 | 15501.8 |
| hypothetical protein | AO275_21175 | Not Available | Negative | 2316942 - 2317235 | 10054.4 |
| fe-s oxidoreductase | AO275_21180 | Not Available | Negative | 2317280 - 2318059 | 28619.0 |
| 1,2-oxophytodienoate reductase | AO275_21185 | Not Available | Negative | 2318406 - 2319524 | 40550.8 |
| marr family transcriptional regulator | AO275_21190 | Not Available | Positive | 2319627 - 2320001 | 14340.5 |
| tetr family transcriptional regulator | AO275_21195 | Not Available | Negative | 2320053 - 2320640 | 21297.1 |
| epimerase | AO275_21200 | Not Available | Positive | 2320717 - 2321610 | 32018.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
