Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| addiction module antidote protein | AO275_21105 | Not Available | Positive | 2297647 - 2297937 | 10851.9 |
| plasmid stabilization protein pare | AO275_21110 | Not Available | Positive | 2297940 - 2298293 | 13434.1 |
| sodium:proton antiporter | AO275_21115 | Not Available | Negative | 2298937 - 2300286 | 47227.9 |
| hypothetical protein | AO275_21120 | Not Available | Positive | 2300638 - 2300874 | 8632.51 |
| chloride channel protein | AO275_21125 | Not Available | Negative | 2300876 - 2302198 | 47248.0 |
| bcct transporter | AO275_21130 | Not Available | Positive | 2302722 - 2304392 | 59567.8 |
| dna polymerase iii subunit epsilon | AO275_21135 | Not Available | Negative | 2304716 - 2305435 | 27024.4 |
| cyclic nucleotide-binding protein | AO275_21140 | Not Available | Negative | 2305438 - 2307315 | 69535.4 |
| sodium:proton antiporter | AO275_21145 | Not Available | Positive | 2307606 - 2308856 | 43883.9 |
| tat pathway signal sequence domain protein | AO275_21150 | Not Available | Negative | 2308990 - 2310909 | 69214.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
