Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | AO275_20955 | Not Available | Negative | 2260916 - 2261476 | 20576.9 |
| excinuclease abc subunit c | AO275_20960 | Not Available | Negative | 2261509 - 2263332 | 67167.5 |
| chemotaxis protein chey | AO275_20965 | Not Available | Negative | 2263335 - 2263979 | 23445.8 |
| hypothetical protein | AO275_20970 | Not Available | Negative | 2264222 - 2264581 | 12853.2 |
| hypothetical protein | AO275_20975 | Not Available | Positive | 2264664 - 2264894 | 8124.7 |
| phospho-2-dehydro-3-deoxyheptonate aldolase | AO275_20980 | Not Available | Positive | 2265583 - 2266665 | 38871.6 |
| peptidylprolyl isomerase | AO275_20985 | Not Available | Positive | 2266749 - 2267030 | 9930.69 |
| abc transporter substrate-binding protein | AO275_20990 | Not Available | Positive | 2267185 - 2269047 | 70394.5 |
| peptide abc transporter permease | AO275_20995 | Not Available | Positive | 2269048 - 2270112 | 38812.0 |
| abc transporter permease | AO275_21000 | Not Available | Positive | 2270112 - 2271134 | 37950.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
