Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter substrate-binding protein | AO275_20905 | Not Available | Negative | 2248275 - 2249276 | 35803.1 |
| chemotaxis protein | AO275_20910 | Not Available | Negative | 2249611 - 2251239 | 58307.1 |
| hypothetical protein | AO275_20915 | Not Available | Positive | 2251483 - 2251911 | 15330.3 |
| formate dehydrogenase | AO275_20920 | Not Available | Positive | 2252116 - 2254419 | 84777.6 |
| aaa family atpase | AO275_20925 | Not Available | Negative | 2254444 - 2256435 | 71954.5 |
| dehydrogenase | AO275_20930 | Not Available | Positive | 2256628 - 2257650 | 36234.3 |
| hydroxypyruvate isomerase | AO275_20935 | Not Available | Positive | 2257647 - 2258435 | 28430.9 |
| rhizopine-binding protein | AO275_20940 | Not Available | Positive | 2258495 - 2259421 | 33591.4 |
| hypothetical protein | AO275_20945 | Not Available | Positive | 2259607 - 2260686 | 39568.2 |
| Trna-gly | Not Available | Not Available | Positive | 2260774 - 2260849 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
