Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO275_20800 | Not Available | Positive | 2230645 - 2230929 | 11015.0 |
| hypothetical protein | AO275_20805 | Not Available | Negative | 2230950 - 2231165 | 7924.81 |
| hypothetical protein | AO275_20810 | Not Available | Positive | 2231351 - 2231992 | 24035.5 |
| hypothetical protein | AO275_20815 | Not Available | Positive | 2231989 - 2232231 | 8408.99 |
| hypothetical protein | AO275_20820 | Not Available | Positive | 2232588 - 2232797 | 7414.98 |
| integrase | AO275_20825 | Not Available | Positive | 2232798 - 2233829 | 38863.0 |
| hypothetical protein | AO275_20830 | Not Available | Positive | 2234200 - 2234601 | 15347.8 |
| marr family transcriptional regulator | AO275_20835 | Not Available | Positive | 2234791 - 2235240 | 16612.1 |
| 3-hydroxyisobutyrate dehydrogenase | AO275_20840 | Not Available | Positive | 2235254 - 2235988 | 25752.6 |
| hypothetical protein | AO275_20845 | Not Available | Positive | 2236029 - 2236268 | 8546.54 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
