Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO275_20750 | Not Available | Negative | 2221932 - 2222483 | 20969.0 |
| hypothetical protein | AO275_20755 | Not Available | Positive | 2222590 - 2223186 | 22257.8 |
| hypothetical protein | AO275_20760 | Not Available | Negative | 2223424 - 2224359 | 34902.3 |
| hypothetical protein | AO275_20765 | Not Available | Negative | 2224573 - 2224773 | 7532.81 |
| nucleoid-associated protein | AO275_20770 | Not Available | Positive | 2224881 - 2225888 | 37486.3 |
| hypothetical protein | AO275_20775 | Not Available | Negative | 2226182 - 2226637 | 16615.2 |
| hypothetical protein | AO275_20780 | Not Available | Negative | 2226641 - 2226913 | 10339.3 |
| phosphoadenosine phosphosulfate reductase | AO275_20785 | Not Available | Positive | 2227034 - 2227987 | 35546.8 |
| hypothetical protein | AO275_20790 | Not Available | Negative | 2227999 - 2228337 | 12291.2 |
| dna methyltransferase | AO275_20795 | Not Available | Positive | 2228429 - 2230477 | 72271.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
