Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alcohol dehydrogenase | AO275_20350 | Not Available | Negative | 2155261 - 2156415 | 41463.9 |
| threonine transporter | AO275_20355 | Not Available | Negative | 2156433 - 2157077 | 22888.8 |
| fad-nad(p)-binding domain protein | AO275_20360 | Not Available | Negative | 2157092 - 2158813 | 63362.5 |
| 2,3-diaminopropionate biosynthesis protein sbnb | AO275_20365 | Not Available | Negative | 2158900 - 2159943 | 37845.0 |
| l-lysine 6-monooxygenase | AO275_20375 | Not Available | Negative | 2160915 - 2162237 | 48739.5 |
| abc transporter | AO275_20380 | Not Available | Negative | 2162290 - 2163267 | 35294.0 |
| fad-binding oxidoreductase | AO275_20385 | Not Available | Negative | 2163264 - 2164406 | 41183.5 |
| hypothetical protein | AO275_20390 | Not Available | Negative | 2164421 - 2165920 | 55921.3 |
| cupin | AO275_20395 | Not Available | Negative | 2165913 - 2166305 | 14907.5 |
| hypothetical protein | AO275_20695 | Not Available | Positive | 2214041 - 2214832 | 28856.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
