Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lactam utilization protein lamb | AO275_20250 | Not Available | Negative | 2133284 - 2134042 | 27690.2 |
| lysr family transcriptional regulator | AO275_20255 | Not Available | Positive | 2134172 - 2135089 | 34494.5 |
| lysr family transcriptional regulator | AO275_20260 | Not Available | Negative | 2135086 - 2136003 | 33848.9 |
| enamine deaminase rida | AO275_20265 | Not Available | Positive | 2136146 - 2136553 | 15099.8 |
| hypothetical protein | AO275_20270 | Not Available | Negative | 2136574 - 2136936 | 14224.8 |
| acetyl-coa acetyltransferase | AO275_20275 | Not Available | Negative | 2137085 - 2138320 | 42647.5 |
| feruloyl-coa synthase | AO275_20280 | Not Available | Negative | 2138317 - 2140203 | 69088.7 |
| salicylaldehyde dehydrogenase | AO275_20285 | Not Available | Negative | 2140355 - 2141803 | 50425.6 |
| p-hydroxycinnamoyl coa hydratase/lyase | AO275_20290 | Not Available | Negative | 2141904 - 2142734 | 31133.5 |
| marr family transcriptional regulator | AO275_20295 | Not Available | Positive | 2142943 - 2143431 | 17871.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
