Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase s8 and s53 subtilisin kexin sedolisin | AO275_20195 | Not Available | Positive | 2121898 - 2123661 | 64047.8 |
| atpase | AO275_20200 | Not Available | Negative | 2123677 - 2124360 | 24868.5 |
| lysr family transcriptional regulator | AO275_20205 | Not Available | Negative | 2124512 - 2125414 | 33197.3 |
| mfs transporter | AO275_20210 | Not Available | Positive | 2125521 - 2126897 | 49626.9 |
| glucarate dehydratase | AO275_20215 | Not Available | Positive | 2126917 - 2128191 | 46625.7 |
| nadph:quinone oxidoreductase | AO275_20220 | Not Available | Negative | 2128232 - 2129233 | 36032.2 |
| hypothetical protein | AO275_20225 | Not Available | Negative | 2129283 - 2129666 | 13536.0 |
| arac family transcriptional regulator | AO275_20230 | Not Available | Negative | 2129730 - 2130518 | 27935.6 |
| allophanate hydrolase | AO275_20240 | Not Available | Negative | 2131326 - 2132300 | 34299.2 |
| allophanate hydrolase | AO275_20245 | Not Available | Negative | 2132297 - 2133169 | 32553.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
