Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO275_20095 | Not Available | Negative | 2098037 - 2099056 | 35638.8 |
| histidine kinase | AO275_20100 | Not Available | Negative | 2099474 - 2101081 | 59092.6 |
| abc transporter | AO275_20105 | Not Available | Negative | 2101216 - 2102970 | 64087.5 |
| beta-glucosidase | AO275_20110 | Not Available | Negative | 2102974 - 2104119 | 43361.5 |
| udp-galactopyranose mutase | AO275_20115 | Not Available | Negative | 2104122 - 2105318 | 45817.2 |
| glycosyl transferase | AO275_20120 | Not Available | Negative | 2105306 - 2106463 | 43364.4 |
| udp-glucose 4-epimerase | AO275_20125 | Not Available | Positive | 2106872 - 2107900 | 37301.7 |
| hypothetical protein | AO275_20130 | Not Available | Positive | 2108005 - 2108520 | 19314.3 |
| cupin | AO275_20135 | Not Available | Negative | 2108609 - 2109175 | 20777.0 |
| hypothetical protein | AO275_20140 | Not Available | Negative | 2109298 - 2110026 | 26406.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
