Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO275_00570 | Not Available | Positive | 2061676 - 2062347 | 25228.5 |
| hypothetical protein | AO275_00575 | Not Available | Negative | 2062911 - 2063207 | 11192.7 |
| hypothetical protein | AO275_00580 | Not Available | Positive | 2065346 - 2066269 | 32323.9 |
| hypothetical protein | AO275_00585 | Not Available | Positive | 2066270 - 2066968 | 25352.6 |
| type iv secretion protein rhs | AO275_00590 | Not Available | Positive | 2067071 - 2068915 | 68785.0 |
| hypothetical protein | AO275_00595 | Not Available | Positive | 2068927 - 2069508 | 21603.7 |
| hypothetical protein | AO275_00600 | Not Available | Positive | 2069543 - 2070010 | 17332.5 |
| hypothetical protein | AO275_19965 | Not Available | Negative | 2071111 - 2071722 | 22674.1 |
| mammalian cell entry protein | AO275_19970 | Not Available | Negative | 2071719 - 2073389 | 60707.8 |
| paraquat-inducible protein a | AO275_19975 | Not Available | Negative | 2073382 - 2073996 | 23089.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
