Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv secretion protein rhs | AO275_00470 | Not Available | Negative | 2031722 - 2034598 | 105955.0 |
| hypothetical protein | AO275_00475 | Not Available | Negative | 2034632 - 2035714 | 40442.4 |
| hypothetical protein | AO275_00480 | Not Available | Negative | 2035754 - 2036095 | 12151.5 |
| hypothetical protein | AO275_00485 | Not Available | Negative | 2036152 - 2037189 | 38901.1 |
| phospholipase | AO275_00490 | Not Available | Negative | 2037191 - 2039122 | 72015.0 |
| impa-like protein | AO275_00495 | Not Available | Negative | 2039628 - 2040725 | 40137.3 |
| fimbrial protein | AO275_00500 | Not Available | Negative | 2040816 - 2041334 | 18244.2 |
| hypothetical protein | AO275_00505 | Not Available | Negative | 2041491 - 2043983 | 94286.7 |
| type vi secretion system protein impm | AO275_00510 | Not Available | Negative | 2043980 - 2044906 | 35044.9 |
| imcf-like family protein | AO275_00515 | Not Available | Negative | 2044938 - 2048858 | 144995.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
