Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyketide cyclase | AO275_00415 | Not Available | Negative | 2016769 - 2017248 | 17290.4 |
| peptide transporter | AO275_00420 | Not Available | Negative | 2017283 - 2020741 | 127530.0 |
| aminobenzoate oxygenase | AO275_00425 | Not Available | Negative | 2020738 - 2021685 | 35398.6 |
| mangotoxin biosynthesis-involved protein mgob | AO275_00430 | Not Available | Negative | 2021750 - 2022526 | 29243.9 |
| gntr family transcriptional regulator | AO275_00435 | Not Available | Negative | 2023283 - 2024017 | 27548.9 |
| nadp-dependent oxidoreductase | AO275_00440 | Not Available | Negative | 2024325 - 2025335 | 37240.0 |
| had family hydrolase | AO275_00445 | Not Available | Negative | 2025440 - 2026129 | 25238.9 |
| gtp-binding protein | AO275_00450 | Not Available | Positive | 2026458 - 2027939 | 52831.2 |
| chemotaxis protein | AO275_00460 | Not Available | Negative | 2028933 - 2030951 | 74055.1 |
| hypothetical protein | AO275_00465 | Not Available | Negative | 2031205 - 2031633 | 15901.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
