Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | AO275_03430 | Not Available | Negative | 1993867 - 1994796 | 33884.4 |
| glutaredoxin | AO275_03435 | Not Available | Negative | 1994830 - 1995072 | 9331.31 |
| hypothetical protein | AO275_03440 | Not Available | Negative | 1995163 - 1995783 | 22200.5 |
| acyltransferase | AO275_03445 | Not Available | Negative | 1995863 - 1996948 | 40535.8 |
| hypothetical protein | AO275_03450 | Not Available | Positive | 1997362 - 1997676 | 11391.5 |
| hypothetical protein | AO275_03455 | Not Available | Positive | 1997681 - 1998073 | 14122.4 |
| hypothetical protein | AO275_03460 | Not Available | Positive | 1998070 - 1998411 | 12926.2 |
| diguanylate phosphodiesterase | AO275_03465 | Not Available | Positive | 1998540 - 1999703 | 43906.6 |
| deoxyguanosinetriphosphate triphosphohydrolase | AO275_03470 | Not Available | Positive | 1999767 - 2001098 | 49814.5 |
| response regulator | AO275_03475 | Not Available | Positive | 2001358 - 2001756 | 14577.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
