Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO275_03230 | Not Available | Positive | 1956395 - 1956589 | 6937.4 |
| nucleoside hydrolase | AO275_03235 | Not Available | Negative | 1956612 - 1957637 | 36603.4 |
| ribose pyranase | AO275_03240 | Not Available | Negative | 1957678 - 1958082 | 14528.9 |
| ribokinase | AO275_03245 | Not Available | Negative | 1958079 - 1958999 | 31276.4 |
| laci family transcriptional regulator | AO275_03250 | Not Available | Negative | 1959030 - 1960046 | 36444.7 |
| abc transporter permease | AO275_03255 | Not Available | Negative | 1960048 - 1961040 | 34290.6 |
| sugar abc transporter atp-binding protein | AO275_03260 | Not Available | Negative | 1961037 - 1962590 | 56189.2 |
| laci family transcriptional regulator | AO275_03265 | Not Available | Negative | 1962645 - 1963604 | 33733.8 |
| hypothetical protein | AO275_03270 | Not Available | Negative | 1963769 - 1963993 | 8040.73 |
| hypothetical protein | AO275_03275 | Not Available | Positive | 1964187 - 1964387 | 7599.87 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
