Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyltransferase superfamily protein | AO275_15965 | Not Available | Negative | 82430 - 83554 | 42352.1 |
| 3-oxoacyl-acp synthase | AO275_15970 | Not Available | Negative | 83700 - 84821 | 40418.9 |
| hypothetical protein | AO275_15975 | Not Available | Positive | 84933 - 85112 | 6150.51 |
| atp-dependent rna helicase hrpa | AO275_15980 | Not Available | Negative | 85114 - 89025 | 147692.0 |
| long-chain fatty acid--coa ligase | AO275_15985 | Not Available | Negative | 89177 - 90868 | 62130.9 |
| long-chain fatty acid--coa ligase | AO275_15990 | Not Available | Negative | 91227 - 92915 | 61561.2 |
| alpha/beta hydrolase | AO275_15995 | Not Available | Positive | 93121 - 94065 | 34895.5 |
| 3-hydroxybutyryl-coa dehydratase | AO275_16000 | Not Available | Positive | 94112 - 94582 | 17248.9 |
| hypothetical protein | AO275_16005 | Not Available | Negative | 94857 - 95015 | 6029.39 |
| aspartate-semialdehyde dehydrogenase | AO275_16010 | Not Available | Negative | 95158 - 95493 | 12296.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
