Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO275_00225 | Not Available | Positive | 1909579 - 1909809 | 8259.66 |
| fe-s oxidoreductase | AO275_00230 | Not Available | Negative | 1909811 - 1910563 | 27017.1 |
| hypothetical protein | AO275_00235 | Not Available | Negative | 1910661 - 1910981 | 11494.7 |
| gnat family acetyltransferase | AO275_00240 | Not Available | Negative | 1911025 - 1911486 | 17396.9 |
| chemotaxis protein chew | AO275_00245 | Not Available | Negative | 1911549 - 1912445 | 31894.8 |
| disulfide bond formation protein b | AO275_00250 | Not Available | Positive | 1912899 - 1913408 | 18214.1 |
| ubiquinol oxidase subunit ii | AO275_00255 | Not Available | Positive | 1913872 - 1914813 | 34860.4 |
| cytochrome o ubiquinol oxidase subunit i | AO275_00260 | Not Available | Positive | 1914817 - 1916829 | 74293.9 |
| cytochrome o ubiquinol oxidase subunit iii | AO275_00265 | Not Available | Positive | 1916832 - 1917464 | 23126.3 |
| cytochrome c oxidase | AO275_00270 | Not Available | Positive | 1917464 - 1917796 | 12332.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
