Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | AO275_00175 | Not Available | Negative | 1896367 - 1897731 | 50548.7 |
| transcriptional regulator | AO275_00180 | Not Available | Negative | 1897721 - 1898398 | 25259.7 |
| acriflavine resistance protein b | AO275_00185 | Not Available | Negative | 1898409 - 1901510 | 110538.0 |
| rnd transporter mfp subunit | AO275_00190 | Not Available | Negative | 1901507 - 1902673 | 41758.1 |
| hypothetical protein | AO275_00195 | Not Available | Positive | 1903044 - 1903337 | 10086.7 |
| fimbrial protein | AO275_00200 | Not Available | Positive | 1903673 - 1904257 | 19630.2 |
| pilus assembly protein | AO275_00205 | Not Available | Positive | 1904319 - 1905065 | 26697.2 |
| fimbrial protein | AO275_00210 | Not Available | Positive | 1905145 - 1907709 | 92743.7 |
| pilus assembly protein | AO275_00215 | Not Available | Positive | 1907706 - 1908479 | 28182.8 |
| pilus assembly protein | AO275_00220 | Not Available | Positive | 1908481 - 1909485 | 36065.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
