Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa carboxylase | AO275_00075 | Not Available | Negative | 1875064 - 1875420 | 13449.7 |
| hypothetical protein | AO275_00080 | Not Available | Negative | 1875479 - 1875949 | 17503.8 |
| glyceraldehyde-3-phosphate dehydrogenase | AO275_00085 | Not Available | Negative | 1876277 - 1877278 | 36313.3 |
| phosphogluconate dehydratase | AO275_00090 | Not Available | Positive | 1877498 - 1879324 | 65495.2 |
| glucokinase | AO275_00095 | Not Available | Positive | 1879321 - 1880286 | 34310.5 |
| chemotaxis protein chey | AO275_00100 | Not Available | Positive | 1880335 - 1881072 | 27506.9 |
| histidine kinase | AO275_00105 | Not Available | Positive | 1881134 - 1882540 | 52436.6 |
| sugar abc transporter substrate-binding protein | AO275_00110 | Not Available | Positive | 1882670 - 1883956 | 45638.3 |
| sugar abc transporter permease | AO275_00115 | Not Available | Positive | 1884061 - 1884969 | 33755.1 |
| sugar abc transporter permease | AO275_00120 | Not Available | Positive | 1884962 - 1885807 | 30551.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
