Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage tail protein | AO275_00025 | Not Available | Positive | 1863228 - 1863818 | 19955.9 |
| hypothetical protein | AO275_00030 | Not Available | Positive | 1863871 - 1864182 | 11453.8 |
| acetyltransferase | AO275_00035 | Not Available | Negative | 1864184 - 1864702 | 19111.8 |
| peptidase m50 | AO275_00040 | Not Available | Negative | 1864730 - 1866826 | 78569.7 |
| multidrug transporter | AO275_00045 | Not Available | Negative | 1866826 - 1868148 | 48352.5 |
| rnd transporter | AO275_00050 | Not Available | Negative | 1868145 - 1868927 | 27964.5 |
| diguanylate phosphodiesterase | AO275_00055 | Not Available | Negative | 1868969 - 1871086 | 78962.7 |
| response regulator receiver protein | AO275_00060 | Not Available | Negative | 1871096 - 1871485 | 14048.2 |
| atpase | AO275_00065 | Not Available | Negative | 1871470 - 1873185 | 63485.6 |
| fis family transcriptional regulator | AO275_00070 | Not Available | Negative | 1873366 - 1874874 | 54657.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
