Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein kinase | AO275_03100 | Not Available | Negative | 1842113 - 1843774 | 61802.2 |
| mfs transporter | AO275_03105 | Not Available | Negative | 1843782 - 1844993 | 42562.6 |
| sucrase | AO275_03110 | Not Available | Positive | 1845952 - 1847202 | 46088.1 |
| histidine kinase | AO275_03115 | Not Available | Negative | 1847392 - 1847967 | 21612.6 |
| nitrate transporter | AO275_03120 | Not Available | Negative | 1847982 - 1849193 | 44455.6 |
| dihydroorotate dehydrogenase (quinone) | AO275_03125 | Not Available | Positive | 1849445 - 1850476 | 36205.9 |
| 50s rrna methyltransferase | AO275_03130 | Not Available | Positive | 1851424 - 1853679 | 84829.3 |
| nucleotide cyclase | AO275_03135 | Not Available | Positive | 1853818 - 1856190 | 88541.5 |
| d-alanyl-d-alanine carboxypeptidase | AO275_03140 | Not Available | Negative | 1856228 - 1857697 | 52987.9 |
| sulfotransferase | AO275_00020 | Not Available | Negative | 1862003 - 1862839 | 31413.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
