Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO275_15915 | Not Available | Positive | 74410 - 74718 | 11500.4 |
| rna 2'-phosphotransferase | AO275_15920 | Not Available | Positive | 74764 - 75345 | 21867.0 |
| regulation of enolase 1 | AO275_15925 | Not Available | Negative | 75391 - 75963 | 20999.0 |
| oxidoreductase | AO275_15930 | Not Available | Positive | 76076 - 76810 | 25895.0 |
| fmn-dependent nadh-azoreductase | AO275_15935 | Not Available | Negative | 76838 - 77437 | 21793.0 |
| 3-phosphoglycerate kinase | AO275_15940 | Not Available | Negative | 77576 - 77890 | 11446.1 |
| lysr family transcriptional regulator | AO275_15945 | Not Available | Positive | 77958 - 78881 | 33653.4 |
| 3-oxoadipate enol-lactonase | AO275_15950 | Not Available | Positive | 78896 - 79684 | 29775.1 |
| peptidylprolyl isomerase | AO275_15955 | Not Available | Positive | 79808 - 80371 | 20269.4 |
| multidrug abc transporter atp-binding protein | AO275_15960 | Not Available | Positive | 80470 - 82302 | 67506.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
