Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO275_02940 | Not Available | Positive | 1806695 - 1807660 | 34274.3 |
| hypothetical protein | AO275_02945 | Not Available | Negative | 1807821 - 1808072 | 8813.3 |
| acetyltransferase | AO275_02950 | Not Available | Positive | 1808687 - 1808968 | 10657.6 |
| phospho-2-dehydro-3-deoxyheptonate aldolase | AO275_02955 | Not Available | Negative | 1809039 - 1810115 | 39014.7 |
| 2-dehydropantoate 2-reductase | AO275_02965 | Not Available | Positive | 1810710 - 1811666 | 34213.4 |
| 5'-nucleotidase | AO275_02970 | Not Available | Positive | 1811685 - 1812590 | 33050.0 |
| universal stress protein uspa | AO275_02975 | Not Available | Positive | 1812682 - 1813176 | 18274.2 |
| cysb family transcriptional regulator | AO275_02980 | Not Available | Positive | 1813337 - 1814311 | 36290.9 |
| phosphoadenosine phosphosulfate reductase | AO275_02985 | Not Available | Negative | 1814381 - 1815115 | 28071.4 |
| phosphoserine phosphatase | AO275_02990 | Not Available | Positive | 1815259 - 1815876 | 23636.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
