Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO275_02840 | Not Available | Positive | 1785014 - 1785292 | 10070.0 |
| aaa family atpase | AO275_02845 | Not Available | Positive | 1785492 - 1786409 | 33100.3 |
| hypothetical protein | AO275_02850 | Not Available | Positive | 1786406 - 1787362 | 35562.5 |
| transglutaminase | AO275_02855 | Not Available | Positive | 1787359 - 1789362 | 74810.4 |
| metal-chelation protein chad | AO275_02860 | Not Available | Positive | 1789383 - 1790144 | 28641.9 |
| acyl-coa thioesterase | AO275_02865 | Not Available | Positive | 1790280 - 1791077 | 28643.6 |
| hypothetical protein | AO275_02870 | Not Available | Positive | 1791337 - 1792956 | 58516.4 |
| glycosyl hydrolase family 31 | AO275_02875 | Not Available | Positive | 1793083 - 1795986 | 107019.0 |
| hypothetical protein | AO275_02880 | Not Available | Negative | 1796028 - 1796255 | 8346.23 |
| chemotaxis protein | AO275_02885 | Not Available | Negative | 1796373 - 1797677 | 46457.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
