Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | AO275_05880 | Not Available | Positive | 1770584 - 1771492 | 33668.0 |
| ribose 5-phosphate isomerase | AO275_05885 | Not Available | Negative | 1771564 - 1772235 | 23365.2 |
| luxr family transcriptional regulator | AO275_02800 | Not Available | Negative | 1775172 - 1775426 | 9522.53 |
| potassium-transporting atpase | AO275_02805 | Not Available | Positive | 1775667 - 1775747 | 2836.65 |
| atpase | AO275_02810 | Not Available | Positive | 1775756 - 1777450 | 60172.2 |
| potassium-transporting atpase subunit b | AO275_02815 | Not Available | Positive | 1777461 - 1779527 | 72692.3 |
| atpase | AO275_02820 | Not Available | Positive | 1779587 - 1780159 | 19648.7 |
| histidine kinase | AO275_02825 | Not Available | Positive | 1780383 - 1783046 | 96665.0 |
| transcriptional regulator | AO275_02830 | Not Available | Positive | 1783102 - 1783794 | 25428.7 |
| alpha/beta hydrolase | AO275_02835 | Not Available | Negative | 1783803 - 1784855 | 38225.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
