Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO275_05830 | Not Available | Positive | 1760077 - 1761192 | 40662.3 |
| tetr family transcriptional regulator | AO275_05835 | Not Available | Negative | 1761238 - 1761882 | 23744.6 |
| hydroxyacid dehydrogenase | AO275_05840 | Not Available | Negative | 1761960 - 1762889 | 34284.3 |
| 4-aminobutyrate aminotransferase | AO275_05845 | Not Available | Positive | 1763172 - 1764476 | 46769.7 |
| 2-haloalkanoic acid dehalogenase | AO275_05850 | Not Available | Positive | 1764557 - 1765213 | 24344.3 |
| asnc family transcriptional regulator | AO275_05855 | Not Available | Positive | 1765261 - 1765749 | 18497.5 |
| 3-phosphoglycerate dehydrogenase | AO275_05860 | Not Available | Negative | 1765839 - 1767068 | 44324.5 |
| fad-linked oxidase | AO275_05865 | Not Available | Positive | 1767230 - 1768624 | 51507.7 |
| hypothetical protein | AO275_05870 | Not Available | Positive | 1768698 - 1769363 | 23674.7 |
| dna-binding protein | AO275_05875 | Not Available | Positive | 1769543 - 1770475 | 34620.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
