Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO275_05780 | Not Available | Positive | 1750554 - 1750994 | 16568.8 |
| taurine abc transporter permease | AO275_05785 | Not Available | Negative | 1751274 - 1752104 | 29890.5 |
| taurine transporter atp-binding subunit | AO275_05790 | Not Available | Negative | 1752101 - 1752886 | 28406.3 |
| taurine abc transporter substrate-binding protein | AO275_05795 | Not Available | Negative | 1752911 - 1753888 | 34499.2 |
| porin | AO275_05800 | Not Available | Positive | 1754666 - 1756018 | 48695.4 |
| peroxidase | AO275_05805 | Not Available | Positive | 1756188 - 1756826 | 23955.3 |
| abc transporter substrate-binding protein | AO275_05810 | Not Available | Positive | 1757101 - 1758066 | 34576.8 |
| alkanesulfonate transporter permease subunit | AO275_05815 | Not Available | Positive | 1758095 - 1758892 | 28510.6 |
| aliphatic sulfonate abc transporter atp-binding protein | AO275_05820 | Not Available | Positive | 1758889 - 1759701 | 29365.0 |
| transporter | AO275_05825 | Not Available | Positive | 1759729 - 1759944 | 7628.36 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
