Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO275_14365 | Not Available | Positive | 1669087 - 1670538 | 53135.9 |
| hypothetical protein | AO275_14370 | Not Available | Negative | 1670552 - 1671625 | 37735.3 |
| ferrous iron transporter b | AO275_14375 | Not Available | Negative | 1671675 - 1674179 | 91018.6 |
| pilus assembly protein | AO275_14380 | Not Available | Negative | 1674219 - 1674971 | 27410.9 |
| hypothetical protein | AO275_14385 | Not Available | Negative | 1675070 - 1675621 | 18702.2 |
| hypothetical protein | AO275_05450 | Not Available | Positive | 1681092 - 1681559 | 17438.9 |
| hypothetical protein | AO275_05455 | Not Available | Positive | 1681692 - 1682228 | 20825.1 |
| hypothetical protein | AO275_05460 | Not Available | Positive | 1682228 - 1682743 | 20174.3 |
| acyl-coa synthetase | AO275_05465 | Not Available | Positive | 1683396 - 1685057 | 60240.2 |
| hypothetical protein | AO275_05470 | Not Available | Negative | 1685024 - 1685851 | 30574.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
