Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphohistidine phosphatase | AO275_14315 | Not Available | Positive | 1656428 - 1656883 | 16487.7 |
| esterase | AO275_14320 | Not Available | Positive | 1656950 - 1657393 | 16018.3 |
| alpha/beta hydrolase | AO275_14325 | Not Available | Positive | 1657691 - 1658512 | 30948.3 |
| alpha/beta hydrolase | AO275_14330 | Not Available | Positive | 1658509 - 1659363 | 30738.3 |
| hypothetical protein | AO275_14335 | Not Available | Positive | 1659503 - 1660321 | 29614.4 |
| hypothetical protein | AO275_14340 | Not Available | Positive | 1660413 - 1661471 | 38105.7 |
| histidine kinase | AO275_14345 | Not Available | Negative | 1662434 - 1663489 | 39207.5 |
| transcriptional regulator | AO275_14350 | Not Available | Negative | 1663486 - 1664235 | 28400.1 |
| hypothetical protein | AO275_14355 | Not Available | Positive | 1665087 - 1666556 | 53003.6 |
| hypothetical protein | AO275_14360 | Not Available | Positive | 1666762 - 1668942 | 75566.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
