Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter substrate-binding protein | AO275_14265 | Not Available | Positive | 1645056 - 1646369 | 45484.3 |
| hypothetical protein | AO275_14270 | Not Available | Negative | 1646451 - 1646723 | 9492.89 |
| heat-shock protein hsp90 | AO275_14275 | Not Available | Positive | 1647057 - 1648964 | 71396.6 |
| dienelactone hydrolase | AO275_14280 | Not Available | Positive | 1649056 - 1649790 | 26236.3 |
| pirin | AO275_14285 | Not Available | Negative | 1649808 - 1650659 | 30813.9 |
| 3-oxoacyl-acp synthase | AO275_14290 | Not Available | Negative | 1650862 - 1652079 | 43036.4 |
| 3-hydroxydecanoyl-acp dehydratase | AO275_14295 | Not Available | Negative | 1652090 - 1652605 | 18807.8 |
| histidine kinase | AO275_14300 | Not Available | Negative | 1652826 - 1654751 | 70872.7 |
| glycerol-3-phosphate dehydrogenase | AO275_14305 | Not Available | Positive | 1655036 - 1656061 | 36567.6 |
| hypothetical protein | AO275_14310 | Not Available | Positive | 1656087 - 1656431 | 12729.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
