Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii citrate synthase | AO275_14215 | Not Available | Negative | 1631645 - 1632934 | 47616.7 |
| succinate dehydrogenase | AO275_14220 | Not Available | Positive | 1633297 - 1633671 | 13354.9 |
| succinate dehydrogenase | AO275_14225 | Not Available | Positive | 1633665 - 1634033 | 13765.1 |
| succinate dehydrogenase | AO275_14230 | Not Available | Positive | 1634037 - 1635809 | 63445.4 |
| succinate dehydrogenase | AO275_14235 | Not Available | Positive | 1635822 - 1636526 | 26096.7 |
| 2-oxoglutarate dehydrogenase subunit e1 | AO275_14240 | Not Available | Positive | 1636787 - 1639618 | 106530.0 |
| dihydrolipoamide succinyltransferase | AO275_14245 | Not Available | Positive | 1639660 - 1640883 | 42622.4 |
| dihydrolipoamide dehydrogenase | AO275_14250 | Not Available | Positive | 1641048 - 1642484 | 50077.6 |
| succinyl-coa synthetase subunit beta | AO275_14255 | Not Available | Positive | 1642691 - 1643857 | 41228.8 |
| succinyl-coa synthetase subunit alpha | AO275_14260 | Not Available | Positive | 1643857 - 1644738 | 30004.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
