Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| electron transfer flavoprotein-ubiquinone oxidoreductase | AO275_14165 | Not Available | Negative | 1622060 - 1623715 | 60411.9 |
| electron transporter rnfb | AO275_14170 | Not Available | Positive | 1624254 - 1625003 | 26412.3 |
| electron transfer flavoprotein subunit beta | AO275_14175 | Not Available | Positive | 1625004 - 1625933 | 31367.5 |
| abc transporter substrate-binding protein | AO275_14180 | Not Available | Positive | 1626053 - 1626895 | 30409.7 |
| hypothetical protein | AO275_14185 | Not Available | Positive | 1626906 - 1627256 | 12777.2 |
| hypothetical protein | AO275_14190 | Not Available | Positive | 1627253 - 1628068 | 30107.8 |
| gntr family transcriptional regulator | AO275_14195 | Not Available | Positive | 1628350 - 1629789 | 53289.6 |
| translation initiation factor 2 | AO275_14200 | Not Available | Positive | 1629973 - 1630560 | 20849.0 |
| hypothetical protein | AO275_14205 | Not Available | Positive | 1630652 - 1630909 | 8968.89 |
| hypothetical protein | AO275_14210 | Not Available | Positive | 1630964 - 1631575 | 22425.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
