Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sam-dependent methyltransferase | AO275_14115 | Not Available | Positive | 1611369 - 1612133 | 28033.1 |
| 3-isopropylmalate dehydrogenase | AO275_14120 | Not Available | Positive | 1612201 - 1613283 | 38910.0 |
| aspartate-semialdehyde dehydrogenase | AO275_14125 | Not Available | Positive | 1613354 - 1614466 | 40485.2 |
| 2-dehydro-3-deoxygalactonokinase | AO275_14130 | Not Available | Positive | 1614644 - 1615648 | 35736.7 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | AO275_14135 | Not Available | Positive | 1615650 - 1616279 | 21823.7 |
| galactonate dehydratase | AO275_14140 | Not Available | Positive | 1616341 - 1617489 | 42337.7 |
| glucarate transporter | AO275_14145 | Not Available | Positive | 1617673 - 1618983 | 47811.3 |
| iclr family transcriptional regulator | AO275_14150 | Not Available | Positive | 1619049 - 1619861 | 29493.6 |
| hydroxyacid dehydrogenase | AO275_14155 | Not Available | Negative | 1619863 - 1620915 | 37715.4 |
| arac family transcriptional regulator | AO275_14160 | Not Available | Positive | 1621096 - 1622001 | 33127.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
