Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pvdj/pvdd/pvdp-like protein | AO275_14015 | Not Available | Positive | 1588145 - 1589779 | 62474.9 |
| rnd transporter | AO275_14020 | Not Available | Negative | 1589951 - 1591339 | 50562.7 |
| macrolide abc transporter atp-binding protein | AO275_14025 | Not Available | Negative | 1591351 - 1593318 | 69445.9 |
| hemolysin secretion protein d | AO275_14030 | Not Available | Negative | 1593319 - 1594491 | 42161.4 |
| acyl-homoserine lactone acylase subunit beta | AO275_14035 | Not Available | Positive | 1594688 - 1597027 | 85059.3 |
| hypothetical protein | AO275_14040 | Not Available | Negative | 1597086 - 1597388 | 11013.9 |
| aromatic amino acid aminotransferase | AO275_14045 | Not Available | Negative | 1597675 - 1598871 | 43271.9 |
| excinuclease abc subunit b | AO275_14050 | Not Available | Positive | 1599257 - 1601272 | 76210.1 |
| glutamate--trna ligase | AO275_14055 | Not Available | Positive | 1601405 - 1602886 | 56472.4 |
| Trna-ala | Not Available | Not Available | Positive | 1603074 - 1603149 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
