Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-directed rna polymerase subunit beta | AO275_15470 | Not Available | Negative | 1564638 - 1568711 | 151114.0 |
| 50s ribosomal protein l7/l12 | AO275_15475 | Not Available | Negative | 1568932 - 1569297 | 12499.2 |
| 50s ribosomal protein l10 | AO275_15480 | Not Available | Negative | 1569372 - 1569872 | 17560.2 |
| 50s ribosomal protein l1 | AO275_15485 | Not Available | Negative | 1570068 - 1570763 | 24062.2 |
| 50s ribosomal protein l11 | AO275_15490 | Not Available | Negative | 1570763 - 1571194 | 14869.0 |
| antitermination protein nusg | AO275_15495 | Not Available | Negative | 1571313 - 1571846 | 20009.1 |
| preprotein translocase subunit sece | AO275_15500 | Not Available | Negative | 1571856 - 1572224 | 13313.8 |
| Trna-trp | Not Available | Not Available | Positive | 1572271 - 1572346 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 1572511 - 1572586 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 1572613 - 1572686 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
