Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l2 | AO275_15420 | Not Available | Negative | 1552935 - 1553759 | 29665.0 |
| 50s ribosomal protein l23 | AO275_15425 | Not Available | Negative | 1553774 - 1554073 | 10945.3 |
| 50s ribosomal protein l4 | AO275_15430 | Not Available | Negative | 1554070 - 1554672 | 21845.3 |
| 50s ribosomal protein l3 | AO275_15435 | Not Available | Negative | 1554685 - 1555320 | 22593.1 |
| 30s ribosomal protein s10 | AO275_15440 | Not Available | Negative | 1555402 - 1555713 | 11753.3 |
| elongation factor tu | AO275_15445 | Not Available | Negative | 1555855 - 1557048 | 43428.2 |
| elongation factor g | AO275_15450 | Not Available | Negative | 1557080 - 1559185 | 77312.4 |
| 30s ribosomal protein s7 | AO275_15455 | Not Available | Negative | 1559216 - 1559686 | 17648.6 |
| 30s ribosomal protein s12 | AO275_15460 | Not Available | Negative | 1559808 - 1560179 | 13725.7 |
| dna-directed rna polymerase subunit beta' | AO275_15465 | Not Available | Negative | 1560374 - 1564573 | 154741.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
