Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s14 | AO275_15370 | Not Available | Negative | 1549114 - 1549419 | 11476.2 |
| 50s ribosomal protein l5 | AO275_15375 | Not Available | Negative | 1549433 - 1549972 | 20458.2 |
| 50s ribosomal protein l24 | AO275_15380 | Not Available | Negative | 1549993 - 1550307 | 11287.9 |
| 50s ribosomal protein l14 | AO275_15385 | Not Available | Negative | 1550319 - 1550687 | 13410.7 |
| 30s ribosomal protein s17 | AO275_15390 | Not Available | Negative | 1550711 - 1550977 | 10097.3 |
| 50s ribosomal protein l29 | AO275_15395 | Not Available | Negative | 1550980 - 1551171 | 7172.78 |
| 50s ribosomal protein l16 | AO275_15400 | Not Available | Negative | 1551171 - 1551584 | 15431.2 |
| 30s ribosomal protein s3 | AO275_15405 | Not Available | Negative | 1551597 - 1552283 | 25754.5 |
| 50s ribosomal protein l22 | AO275_15410 | Not Available | Negative | 1552297 - 1552629 | 11893.6 |
| 30s ribosomal protein s19 | AO275_15415 | Not Available | Negative | 1552643 - 1552918 | 10307.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
