Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s4 | AO275_15320 | Not Available | Negative | 1543454 - 1544074 | 23077.8 |
| 30s ribosomal protein s11 | AO275_15325 | Not Available | Negative | 1544093 - 1544482 | 13616.4 |
| 30s ribosomal protein s13 | AO275_15330 | Not Available | Negative | 1544513 - 1544869 | 13342.5 |
| preprotein translocase subunit secy | AO275_15335 | Not Available | Negative | 1545145 - 1546479 | 47901.6 |
| 50s ribosomal protein l15 | AO275_15340 | Not Available | Negative | 1546480 - 1546914 | 15195.4 |
| 50s ribosomal protein l30 | AO275_15345 | Not Available | Negative | 1546918 - 1547094 | 6525.29 |
| 30s ribosomal protein s5 | AO275_15350 | Not Available | Negative | 1547097 - 1547597 | 17694.6 |
| 50s ribosomal protein l18 | AO275_15355 | Not Available | Negative | 1547601 - 1547951 | 12604.3 |
| 50s ribosomal protein l6 | AO275_15360 | Not Available | Negative | 1547962 - 1548495 | 19266.3 |
| 30s ribosomal protein s8 | AO275_15365 | Not Available | Negative | 1548508 - 1548900 | 14060.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
