Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerophosphodiester phosphodiesterase | AO275_15270 | Not Available | Positive | 1531764 - 1532525 | 27912.7 |
| inositol monophosphatase | AO275_15275 | Not Available | Positive | 1532522 - 1533277 | 26970.3 |
| n-ethylmaleimide reductase | AO275_15280 | Not Available | Negative | 1533324 - 1534415 | 38859.7 |
| single-stranded dna-binding protein | AO275_15285 | Not Available | Negative | 1534655 - 1535209 | 20562.9 |
| mfs transporter | AO275_15290 | Not Available | Negative | 1535219 - 1536613 | 49059.4 |
| abc-atpase uvra | AO275_15295 | Not Available | Positive | 1536802 - 1539636 | 104371.0 |
| bacterioferritin | AO275_15300 | Not Available | Negative | 1539767 - 1540231 | 18063.7 |
| catalase | AO275_15305 | Not Available | Negative | 1540387 - 1541832 | 53746.9 |
| 50s ribosomal protein l17 | AO275_15310 | Not Available | Negative | 1542002 - 1542388 | 14497.7 |
| dna-directed rna polymerase subunit alpha | AO275_15315 | Not Available | Negative | 1542430 - 1543431 | 36647.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
