Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arylesterase | AO275_15220 | Not Available | Positive | 1519979 - 1520797 | 29859.3 |
| ureidoglycolate lyase | AO275_15225 | Not Available | Negative | 1520968 - 1521816 | 30394.3 |
| oxidoreductase | AO275_15230 | Not Available | Negative | 1521855 - 1522589 | 25493.7 |
| hypothetical protein | AO275_15235 | Not Available | Positive | 1522929 - 1523741 | 29453.3 |
| ligand-gated channel | AO275_15240 | Not Available | Positive | 1523948 - 1526236 | 83153.1 |
| nagc family transcriptional regulator | AO275_15245 | Not Available | Negative | 1526248 - 1527378 | 41339.5 |
| glycerol-3-phosphate abc transporter substrate-binding protein | AO275_15250 | Not Available | Positive | 1527546 - 1528856 | 47978.5 |
| glycerol-3-phosphate transporter permease | AO275_15255 | Not Available | Positive | 1528853 - 1529746 | 32431.6 |
| abc transporter permease | AO275_15260 | Not Available | Positive | 1529743 - 1530636 | 32609.1 |
| glycerol-3-phosphate abc transporter atp-binding protein | AO275_15265 | Not Available | Positive | 1530633 - 1531751 | 40680.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
